MRIQC: individual T1w report

Summary

  • BIDS filename: sub-3016_ses-1_T1w.
  • Date and time: 2022-12-08, 02:00.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.40336187765209686
cnr3.142006364867312
efc0.5993779874686977
fber1480.6401711749484
fwhmavg3.3365666666666662
fwhmx3.43276
fwhmy3.51169
fwhmz3.06525
icvscsf0.17167081872673923
icvsgm0.4339557171662447
icvswm0.39437346410701607
inumed1.7061749696731567
inurange0.6849725723266606
qi10.0
qi20.005706549881677181
rpvecsf29.135961488089638
rpvegm12.70484605607343
rpvewm16.402019429380132
sizex176
sizey256
sizez256
snrcsf1.660920870045617
snrgm10.0895952740767
snrtotal10.283207353029471
snrwm19.099105914966096
snrdcsf29.335124267017864
snrdgm60.33467364056968
snrdtotal57.8012124164649
snrdwm83.73383934180717
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk3.2464475989238393
summarybgmad7.824033781162344
summarybgmean17.978502597333833
summarybgmedian16.18350714445114
summarybgn2573560.0
summarybgp057.880664348602295
summarybgp9532.859555810689926
summarybgstdv8.299060141621105
summarycsfk39.26013007321838
summarycsfmad126.74934725482997
summarycsfmean399.89785948613
summarycsfmedian350.33774814009666
summarycsfn14663.0
summarycsfp05222.0658632516861
summarycsfp95620.8767334431409
summarycsfstdv210.92263209859237
summarygmk1.047481501037356
summarygmmad64.10491678032346
summarygmmean723.1373758383411
summarygmmedian720.5530648380518
summarygmn17522.0
summarygmp05612.8658974066376
summarygmp95845.2716144621372
summarygmstdv71.41341982409543
summarywmk0.6054921271606095
summarywmmad48.61332989362203
summarywmmean998.6335274458122
summarywmmedian1000.0000153779984
summarywmn223948.0
summarywmp05909.3020122945309
summarywmp951081.5508187711239
summarywmstdv52.358355787257985
tpmoverlapcsf0.1829083114862442
tpmoverlapgm0.4615662395954132
tpmoverlapwm0.5148358345031738
wm2max0.48987191876090574
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime10:45:44.605000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VD13D_LATEST_20130810
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0647281, 0.997903, 4.37086e-08, -0.0259936, 0.0016861, -0.999661]
ImageOrientationTextSag>Cor(3.7)>Tra(1.5)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.1
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps255
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_ipat2
PulseSequenceDetails%CustomerSeq%\tfl_epinav_711E
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0405335
ScanOptionsIR
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_ipat2 RMS
SeriesNumber7
ShimSetting[2618, 5478, -7498, 303, -117, -812, 51, -106]
SliceThickness1
SoftwareVersionssyngo MR D13D
SpoilingStateTrue
StationNameMEDPC
TxRefAmp232.694
md5sumfbc9a31450aa3c04f6f47f04548a301e
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.